ProDy 0.7.2


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License:
GPL
Category:
Math
Publisher:
Ahmet-Bakan
Size:
188 KB
Last Updated:
2013-10-10
Operating System:
Mac OS X
Price:
FREE
Download
Publisher's description - ProDy 0.7.2
 
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ProDy is a free and open source Python package designed for protein structural dynamics analysis.

Here are some key features of "ProDy":

Protein structure analysis:
· fast PDB file parser and a powerful atom selector
· functions for matching and comparing polypeptide chains

Normal Mode Analysis (NMA):
· Elastic network models (Anisotropic/Gaussian network models)
· PCA of X-ray structures, NMR models, MD snapshots
· Functions for comparative NMA, i.e. calculate/plot overlaps

Requirements:

· Python

What`s New in This Release: [ read full changelog ]

New Features:
· parseDCD() is implemented for parsing coordinate sets from DCD files.

Improvements:
· parsePDB() parses SEQRES records in header sections.

Changes:
· Major classes can be instantiated without passing a name argument.
· Default selection in NMWiz ProDy interface is changed to ensure selection only protein C?

 

Also See ...
maRla 1.0

maRla 1.0
BLAST Ring Image Generator 0.95

BLAST Ring Image Generator 0.95
Syntainia 0.3.1.1 Beta

Syntainia 0.3.1.1 Beta
TRiCYCLE 0.2.4

TRiCYCLE 0.2.4
CalcuWeight 2.01

CalcuWeight 2.01



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